Analysis of chromosome 1q gain as genetic marker for risk stratification of pediatric ependymoma patients by multiplex ligation-dependent probe amplification (MLPA)
N Velez-Char, E Dörner, A zur Mühlen, AO von Beuren, S Rutkowski, T Pietsch · Klinische Pädiatrie · 2012 · Heft 04
Bibliografische Angaben
Zusammenfassung
Introduction: In retrospective series of patients suffering ependymoma, gain of material of chromosome arm 1q was identified to predict worse outcome. So far, this marker was mainly assessed by FISH analysis. Methods & Results: To validate this marker in a defined patient cohort, we analysed chromosome 1q in 138 consecutive cases enrolled into the HIT2000 trial in which formalin-fixed, paraffin embedded material was available for DNA extraction. By using MLPA for 5 markers located on chromosome 1q and control markers, we were able to analyse 137/138 cases (99%) and found 1q gain in 21 cases (15.3%). Patients wit…